Wednesday, October 3, 2012

Our contribution to the TCGA findings of a Comprehensive Breast Cancer Analysis


The Windber Research Institute is proud to be part of the just published online article in the journal Nature http://www.nature.com/nature/journal/vaop/ncurrent/full/nature11412.html  (September 23rd, 2012) by The Cancer Genome Atlas (TCGA) Network entitled “Comprehensive molecular portraits of human tumors.” Together with our military collaborators, the Walter Reed National Military Medical Center (WRNMMC), we provided breast tissue specimens, DNA and relevant donor data for this ground breaking research. A total of fifteen Tissue Source Sites were involved in this national scientific project sponsored by the National Institutes of Health (NIH). Our journey to such a success story was as expected not very easy. Our efforts through the years to acquire and maintain the very best quality tissue specimens paid off when we qualified to become tissue providers for TCGA. The strict qualification criteria of this project kept us on our toes. Our qualification rates were usually between 85% and 100%. We were highly commended by the Biospecimen Core Resource group (Nationwide Children’s Hospital Biospecimen Core) as they compared our performance with that of the other tissue source sites. All this attests to the hard work and dedication of our staff. Their constant and daily efforts to provide the highest level of efficiency and perfection made it possible for us to be part of this major scientific project.  As a small not for profit research institute established twelve years ago, we are proud to be in the same playing field with institutions such as Duke University, Mayo Clinic, MD Anderson Cancer Center, University of Pittsburgh and University of North Carolina at Chapel Hill to mention just a few of the other Tissue Source Sites for this project. 

In this project, 800 breast tumors were genetically characterized using multiple technological platforms. The study was able to characterize four major sub-types of breast cancer (HER-2 enriched, Luminal A, Luminal B, and Basal-like) as previously described and provided a more comprehensive understanding of the mechanism behind each type of breast cancer. Furthermore, the study identified molecular similarities between one sub-type of breast cancer and ovarian cancer. Charles Perou, PhD, the corresponding author says “This study has now provided a near complete framework for the genetic causes of breast cancer which will significantly impact clinical medicine in the coming years as these genetic markers are evaluated as possible markers of therapeutic responsiveness.” Dr. Perou is the May Goldman Shaw Distinguished professor of Molecular Oncology at the University of North Carolina at Chapel Hill and a member of UNC Lineberger Comprehensive Cancer Center.

The tissue bank at Windber will continue to engage in ground breaking research activities in the coming years. This will encourage our donors and help with new therapeutic targets for treatment to alleviate the sufferings of the many breast cancer patients out there. We are working for you!

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